Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aotP | argR | PA0892 | PA0893 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | 0.960 |
| aotP | aruB | PA0892 | PA0899 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.891 |
| aotP | aruC | PA0892 | PA0895 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | N-succinylglutamate 5-semialdehyde dehydrogenase; Transaminates both N(2)-acetylornithine and N(2)- succinylornithine; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.774 |
| aotP | aruD | PA0892 | PA0898 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate; Belongs to the aldehyde dehydrogenase family. AstD subfamily. | 0.832 |
| aotP | aruE | PA0892 | PA0901 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.847 |
| aotP | aruF | PA0892 | PA0896 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Arginine/ornithine succinyltransferase AI subunit; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine. Also acts on L-ornithine. | 0.832 |
| aotP | aruG | PA0892 | PA0897 | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | Arginine/ornithine succinyltransferase AII subunit; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa). | 0.874 |
| argR | aotP | PA0893 | PA0892 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | 0.960 |
| argR | aruB | PA0893 | PA0899 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.579 |
| argR | aruC | PA0893 | PA0895 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | N-succinylglutamate 5-semialdehyde dehydrogenase; Transaminates both N(2)-acetylornithine and N(2)- succinylornithine; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.838 |
| argR | aruD | PA0893 | PA0898 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate; Belongs to the aldehyde dehydrogenase family. AstD subfamily. | 0.702 |
| argR | aruE | PA0893 | PA0901 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.638 |
| argR | aruF | PA0893 | PA0896 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Arginine/ornithine succinyltransferase AI subunit; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine. Also acts on L-ornithine. | 0.830 |
| argR | aruG | PA0893 | PA0897 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Arginine/ornithine succinyltransferase AII subunit; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa). | 0.870 |
| argR | aruH | PA0893 | PA4976 | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | Arginine:Pyruvate Transaminase, AruH; Catalyzes the conversion of L-arginine into 2-ketoarginine via transamination. L-arginine is the best substrate, but it can also use L-lysine, L-methionine, L-leucine, ornithine and L-glutamine, which indicates that it may have a broader physiological function in amino acid catabolism. | 0.495 |
| aruB | aotP | PA0899 | PA0892 | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. | 0.891 |
| aruB | argR | PA0899 | PA0893 | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | Transcriptional regulator ArgR; ArgR could be a transcriptional activator of the dauBAR operon in response to the presence of L-Arg. | 0.579 |
| aruB | aruC | PA0899 | PA0895 | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | N-succinylglutamate 5-semialdehyde dehydrogenase; Transaminates both N(2)-acetylornithine and N(2)- succinylornithine; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.996 |
| aruB | aruD | PA0899 | PA0898 | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | Succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate; Belongs to the aldehyde dehydrogenase family. AstD subfamily. | 0.999 |
| aruB | aruE | PA0899 | PA0901 | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.998 |
page 1 of 5